CSPG4

GENERAL INFORMATION

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Gene name

CSPG4

Gene description

Chondroitin sulfate proteoglycan 4

Protein class

Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Mixed
GTEx:Mixed

Protein evidence

Evidence at protein level

Protein localization

Ubiquitous granular cytoplasmic expression.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Supportive based on 3 antibodies.
HPA002951 , HPA042785 , CAB016189
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Mixed

Organ

Expression

GTEx dataset
RNA tissue category:  Mixed

Organ

Expression



GENE INFORMATION

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Gene name

CSPG4 (HGNC Symbol)

Synonyms

HMW-MAA, MCSP, MCSPG, MEL-CSPG, MSK16, NG2

Description

Chondroitin sulfate proteoglycan 4 (HGNC Symbol)

Entrez gene summary

A human melanoma-associated chondroitin sulfate proteoglycan plays a role in stabilizing cell-substratum interactions during early events of melanoma cell spreading on endothelial basement membranes. CSPG4 represents an integral membrane chondroitin sulfate proteoglycan expressed by human malignant melanoma cells. [provided by RefSeq, Jul 2008]

Chromosome

15

Cytoband

q24.2

Chromosome location (bp)

75674322 - 75712848

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000173546 (version 78.38)

Entrez gene

1464

UniProt

Q6UVK1 (UniProt - Evidence at protein level)

neXtProt

NX_Q6UVK1

Antibodypedia

CSPG4 antibodies


PROTEIN BROWSER

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ENST00000308508
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CSPG4-001 ENSP00000312506
ENST00000308508
Q6UVK1
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Show » Show » 2322 250.5 Yes 1