CSPG4

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.9 FPKM
GTEx:6.2 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Low
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002951

 

Antibody HPA042785

 

Antibody CAB016189

 

Fibroblasts

Low   Low   Medium  

Keratinocytes

Low   Medium   Low  

Langerhans

Low   Not detected   Medium  

Melanocytes

Medium   Low   Medium  
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002951

 

Antibody HPA042785

 

Antibody CAB016189

 

Epidermal cells

High   High   Medium  
        
        
        
     
     

SKIN - HPA RNA-seq

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Average FPKM

3.9

overview Female, age 34
Sample 1
FPKM: 3.8
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 1.1
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 6.8

SKIN - GTEx RNA-seq

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Average RPKM

6.2

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 5.9
Samples: 250

Max RPKM: 31.3
Min RPKM: 1
Std RPKM: 3.7
Median RPKM: 5.3
GTEX-ZVTK-0226-SM-51MRG 31.3
GTEX-WFON-1926-SM-3LK7L 25.8
GTEX-11TT1-1826-SM-5EQLV 25.7
GTEX-WHSE-0126-SM-3NMBT 23.0
GTEX-11O72-0626-SM-5PNYE 15.0
GTEX-145MF-0926-SM-5Q5EA 15.0
GTEX-ZAJG-1526-SM-5CVML 14.4
GTEX-ZT9W-1126-SM-57WDR 14.2
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 6.5
Samples: 357

Max RPKM: 22.5
Min RPKM: 1.7
Std RPKM: 3
Median RPKM: 5.8
GTEX-111CU-1926-SM-5GZYZ 22.5
GTEX-Y3I4-2126-SM-4TT7C 17.9
GTEX-11TUW-2726-SM-5EQLC 17.6
GTEX-11TT1-2526-SM-5EGIB 17.4
GTEX-131XG-2626-SM-5KM17 15.8
GTEX-RN64-0126-SM-2TC68 15.5
GTEX-147F4-0226-SM-5QGPW 15.2
GTEX-WH7G-2326-SM-3NMBC 14.4
Show all