CSPG4

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.5 FPKM
GTEx:32.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002951

 

Antibody HPA042785

 

Antibody CAB016189

 

Endothelial cells

Low   Medium   Medium  

Glandular cells

Medium   High   High  

Peripheral nerve/ganglion

Not available   Medium   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

4.5

overview Male, age 54
Sample 1
FPKM: 5.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 6.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 4.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

32.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 44.4
Samples: 149

Max RPKM: 90.9
Min RPKM: 19
Std RPKM: 10.7
Median RPKM: 43.4
GTEX-14C5O-2626-SM-5RQI5 90.9
GTEX-ZDTS-2726-SM-5L3E2 78.7
GTEX-XUJ4-2126-SM-4BOOX 72.2
GTEX-XAJ8-0726-SM-47JY5 69.8
GTEX-13O61-1526-SM-5KM3P 66.8
GTEX-139UW-2326-SM-5KM1Y 65.7
GTEX-WFG7-1626-SM-4LVMF 64.4
GTEX-ZLFU-1426-SM-4WWEU 64.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 21.4
Samples: 196

Max RPKM: 117.6
Min RPKM: 0.9
Std RPKM: 20.1
Median RPKM: 14.7
GTEX-XAJ8-0426-SM-47JYJ 117.6
GTEX-14ICL-1226-SM-5S2RD 81.5
GTEX-WEY5-1426-SM-4LMJ3 80.2
GTEX-TKQ1-0626-SM-4DXTS 77.0
GTEX-Z93S-2426-SM-5HL8N 67.9
GTEX-X5EB-0926-SM-46MVT 67.4
GTEX-YEC4-1926-SM-5IFHJ 66.1
GTEX-13FH7-1526-SM-5J2N6 63.8
Show all