PSMF1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:41.8 FPKM
GTEx:18.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA041122

 

Antibody HPA041300

 

Endothelial cells

Low   Low  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Low   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

41.8

overview Male, age 54
Sample 1
FPKM: 28.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 48.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 40.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 42.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 43.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 43.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 46.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

18.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 18.9
Samples: 149

Max RPKM: 28.1
Min RPKM: 11.9
Std RPKM: 2.5
Median RPKM: 19.1
GTEX-11P81-1426-SM-5P9JN 28.1
GTEX-1399U-2226-SM-5KLZI 26.5
GTEX-13O1R-2426-SM-5KLZZ 26.2
GTEX-ZLV1-1326-SM-4WWER 24.1
GTEX-WHPG-1626-SM-4M1ZL 23.8
GTEX-ZYFG-1826-SM-5GZWX 23.0
GTEX-11TT1-0926-SM-5GU5M 22.9
GTEX-132NY-2726-SM-5PNY2 22.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.3
Samples: 196

Max RPKM: 24.1
Min RPKM: 9.4
Std RPKM: 2.3
Median RPKM: 18.4
GTEX-13U4I-2426-SM-5LU34 24.1
GTEX-13W3W-2126-SM-5K7UX 23.6
GTEX-117YX-0826-SM-5H11J 23.5
GTEX-OXRL-1426-SM-3NM9E 23.2
GTEX-ZYFG-1926-SM-5GID5 23.0
GTEX-QMRM-1226-SM-447C6 22.9
GTEX-U3ZH-1326-SM-4DXSF 22.7
GTEX-11P81-1126-SM-5GU5G 22.4
Show all