VPS16

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.0 FPKM
GTEx:13.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA043229

 

Antibody HPA048661

 

Endothelial cells

Not detected   Medium  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Low   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

11.0

overview Male, age 54
Sample 1
FPKM: 8.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

13.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 12.2
Samples: 149

Max RPKM: 23.7
Min RPKM: 7.6
Std RPKM: 2.3
Median RPKM: 11.7
GTEX-13O1R-2426-SM-5KLZZ 23.7
GTEX-1339X-1726-SM-5P9J9 18.6
GTEX-12WSJ-1426-SM-5GCON 18.0
GTEX-14E6C-2226-SM-5QGQG 17.6
GTEX-12WSL-1826-SM-5LZW9 17.4
GTEX-13OW6-2226-SM-5N9FL 16.7
GTEX-131XG-1526-SM-5GCNQ 16.6
GTEX-WI4N-2226-SM-4OOS9 16.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 14.1
Samples: 196

Max RPKM: 24.4
Min RPKM: 5.8
Std RPKM: 2.5
Median RPKM: 14
GTEX-UPIC-1726-SM-4IHKG 24.4
GTEX-O5YT-1426-SM-3MJHC 21.2
GTEX-11WQK-2126-SM-5EQME 20.9
GTEX-TKQ2-1326-SM-4DXT9 20.8
GTEX-1339X-1626-SM-5IJDN 20.7
GTEX-11TUW-2026-SM-5EQL8 19.3
GTEX-1122O-1526-SM-5N9CL 18.1
GTEX-R53T-1326-SM-48FCQ 18.1
Show all