NELFA

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:7.9 FPKM
GTEx:7.8 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA039858

 

Antibody CAB009960

 

Endothelial cells

Medium   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

Medium   Medium  
   
   

COLON - HPA RNA-seq

? »

Average FPKM

7.9

overview Male, age 54
Sample 1
FPKM: 10.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

7.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.4
Samples: 149

Max RPKM: 11
Min RPKM: 3.9
Std RPKM: 1.1
Median RPKM: 7.5
GTEX-14E6C-2226-SM-5QGQG 11.0
GTEX-139TS-2226-SM-5J2N1 10.3
GTEX-11P81-1426-SM-5P9JN 10.2
GTEX-13PVQ-2726-SM-5L3H7 10.2
GTEX-13X6K-2726-SM-5O9DG 9.7
GTEX-ZVT4-2626-SM-5N9GJ 9.3
GTEX-13VXT-2026-SM-5L3EW 9.2
GTEX-ZC5H-2426-SM-4WAZ6 9.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 8.1
Samples: 196

Max RPKM: 11.7
Min RPKM: 4.6
Std RPKM: 1.2
Median RPKM: 8.2
GTEX-139TS-1926-SM-5IJFO 11.7
GTEX-12C56-0626-SM-5EGGC 10.7
GTEX-1399R-2226-SM-5P9JB 10.7
GTEX-UPIC-1726-SM-4IHKG 10.7
GTEX-13O21-2426-SM-5MR4A 10.6
GTEX-UJMC-1326-SM-4IHLS 10.6
GTEX-R53T-1326-SM-48FCQ 10.3
GTEX-WQUQ-2526-SM-4MVNO 10.3
Show all