SEPT5

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.2 FPKM
GTEx:4.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA029095

 

Antibody HPA063885

 

Antibody CAB016120

 

Endothelial cells

Low   Not detected   Low  

Glandular cells

Low   Not detected   Not detected  

Peripheral nerve/ganglion

Medium   Not detected   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

6.2

overview Male, age 54
Sample 1
FPKM: 2.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.4
Samples: 149

Max RPKM: 13.5
Min RPKM: 1.4
Std RPKM: 2.4
Median RPKM: 5.3
GTEX-12ZZY-2726-SM-5EQ45 13.5
GTEX-1399R-2126-SM-5K7WZ 12.8
GTEX-ZAJG-2626-SM-5S2NU 11.5
GTEX-14A5I-2426-SM-5Q5CP 11.0
GTEX-132NY-2726-SM-5PNY2 10.3
GTEX-117XS-2226-SM-5GIE1 10.1
GTEX-11EI6-2626-SM-5PNVT 10.1
GTEX-13OW6-2226-SM-5N9FL 9.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 13.6
Min RPKM: 0.5
Std RPKM: 2.5
Median RPKM: 2.6
GTEX-11GSP-1626-SM-5986N 13.6
GTEX-145LS-2726-SM-5Q5D8 11.1
GTEX-11TTK-2426-SM-5PNYO 10.9
GTEX-12ZZZ-2426-SM-5GCNN 10.6
GTEX-14AS3-1126-SM-5Q5CR 10.2
GTEX-13FHP-2426-SM-5KLZ5 8.9
GTEX-147JS-2526-SM-5S2Q8 8.9
GTEX-14BMV-2426-SM-5S2PP 8.5
Show all