MSC

COLON - Expression summary

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RNA expression

HPA:1.7 FPKM
GTEx:1.8 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA062893

 

Endothelial cells

Not detected  

Glandular cells

Not detected  

Peripheral nerve/ganglion

Not detected  
 
 

COLON - HPA RNA-seq

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Average FPKM

1.7

overview Male, age 54
Sample 1
FPKM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 7.8
Min RPKM: 0
Std RPKM: 1.1
Median RPKM: 1
GTEX-YJ8A-1726-SM-5P9IQ 7.8
GTEX-11TT1-0926-SM-5GU5M 5.7
GTEX-132NY-2726-SM-5PNY2 4.6
GTEX-14C39-1626-SM-5S2P4 4.2
GTEX-11PRG-2026-SM-5GU5F 4.1
GTEX-13FHO-2726-SM-5K7VG 3.5
GTEX-13X6K-2726-SM-5O9DG 3.5
GTEX-145MH-2726-SM-5QGQ6 3.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.4
Samples: 196

Max RPKM: 13.9
Min RPKM: 0.1
Std RPKM: 2.1
Median RPKM: 1.8
GTEX-11TT1-1026-SM-5PNW7 13.9
GTEX-13OVJ-1726-SM-5IJDZ 12.0
GTEX-147JS-2526-SM-5S2Q8 10.5
GTEX-117YW-1826-SM-5PNY5 10.1
GTEX-13W3W-2126-SM-5K7UX 9.2
GTEX-13OVG-1426-SM-5K7VP 8.9
GTEX-ZAB4-2226-SM-5HL97 8.8
GTEX-14C38-2626-SM-5RQI4 8.5
Show all