JAM3

COLON - Expression summary

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RNA expression

HPA:11.4 FPKM
GTEx:11.8 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA003417

 

Endothelial cells

Low  

Glandular cells

Low  

Peripheral nerve/ganglion

Low  
 
 

COLON - HPA RNA-seq

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Average FPKM

11.4

overview Male, age 54
Sample 1
FPKM: 6.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 15.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 28.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

11.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 14.9
Samples: 149

Max RPKM: 33.9
Min RPKM: 3.1
Std RPKM: 6.4
Median RPKM: 14
GTEX-ZAB5-1426-SM-5HL9D 33.9
GTEX-111YS-1826-SM-5GIEP 31.1
GTEX-ZXES-1726-SM-5E43G 30.6
GTEX-11ZTT-1626-SM-5EQKR 29.9
GTEX-14E6E-1726-SM-5S2R6 28.1
GTEX-13PVR-1726-SM-5Q5EC 27.8
GTEX-WYVS-1126-SM-4SOJX 26.2
GTEX-13OVI-2126-SM-5KM3U 25.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 8.6
Samples: 196

Max RPKM: 32.4
Min RPKM: 0.2
Std RPKM: 6.9
Median RPKM: 7.3
GTEX-14AS3-1126-SM-5Q5CR 32.4
GTEX-11GSP-1626-SM-5986N 27.1
GTEX-11ONC-2026-SM-5HL61 25.2
GTEX-111YS-1626-SM-5GZZ9 24.6
GTEX-O5YW-1426-SM-3MJHF 24.2
GTEX-XXEK-1926-SM-4BRVD 23.4
GTEX-ZV6S-1226-SM-59HLH 23.4
GTEX-13O61-1626-SM-5KM3T 22.4
Show all