GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0000228 [nuclear chromosome]
GO:0000737 [DNA catabolic process, endonucleolytic]
GO:0000975 [regulatory region DNA binding]
GO:0000989 [transcription factor binding transcription factor activity]
GO:0001047 [core promoter binding]
GO:0001077 [RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription]
GO:0001078 [RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription]
GO:0001837 [epithelial to mesenchymal transition]
GO:0002062 [chondrocyte differentiation]
GO:0003131 [mesodermal-endodermal cell signaling]
GO:0003677 [DNA binding]
GO:0003680 [AT DNA binding]
GO:0003906 [DNA-(apurinic or apyrimidinic site) lyase activity]
GO:0004677 [DNA-dependent protein kinase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006284 [base-excision repair]
GO:0006325 [chromatin organization]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0007067 [mitotic nuclear division]
GO:0007095 [mitotic G2 DNA damage checkpoint]
GO:0007275 [multicellular organismal development]
GO:0008134 [transcription factor binding]
GO:0008301 [DNA binding, bending]
GO:0009615 [response to virus]
GO:0010564 [regulation of cell cycle process]
GO:0010628 [positive regulation of gene expression]
GO:0030261 [chromosome condensation]
GO:0031052 [chromosome breakage]
GO:0031492 [nucleosomal DNA binding]
GO:0031507 [heterochromatin assembly]
GO:0032993 [protein-DNA complex]
GO:0035497 [cAMP response element binding]
GO:0035500 [MH2 domain binding]
GO:0035501 [MH1 domain binding]
GO:0035978 [histone H2A-S139 phosphorylation]
GO:0035985 [senescence-associated heterochromatin focus]
GO:0035986 [senescence-associated heterochromatin focus assembly]
GO:0035987 [endodermal cell differentiation]
GO:0035988 [chondrocyte proliferation]
GO:0042769 [DNA damage response, detection of DNA damage]
GO:0043065 [positive regulation of apoptotic process]
GO:0043066 [negative regulation of apoptotic process]
GO:0043392 [negative regulation of DNA binding]
GO:0043922 [negative regulation by host of viral transcription]
GO:0045444 [fat cell differentiation]
GO:0045869 [negative regulation of single stranded viral RNA replication via double stranded DNA intermediate]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0046332 [SMAD binding]
GO:0048333 [mesodermal cell differentiation]
GO:0048762 [mesenchymal cell differentiation]
GO:0048863 [stem cell differentiation]
GO:0051575 [5'-deoxyribose-5-phosphate lyase activity]
GO:0070742 [C2H2 zinc finger domain binding]
GO:0071141 [SMAD protein complex]
GO:0071158 [positive regulation of cell cycle arrest]
GO:0090402 [oncogene-induced cell senescence]
GO:2000036 [regulation of stem cell maintenance]
GO:2000648 [positive regulation of stem cell proliferation]
GO:2000679 [positive regulation of transcription regulatory region DNA binding]
GO:2000685 [positive regulation of cellular response to X-ray]
GO:2000774 [positive regulation of cellular senescence]
GO:2001022 [positive regulation of response to DNA damage stimulus]
GO:2001033 [negative regulation of double-strand break repair via nonhomologous end joining]
GO:2001038 [regulation of cellular response to drug]
