HMGA2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:1.5 FPKM
GTEx:0.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA039076

 

Antibody CAB017809

 

Endothelial cells

Medium   High  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   High  
   
   

COLON - HPA RNA-seq

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Average FPKM

1.5

overview Male, age 54
Sample 1
FPKM: 1.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 0.4
Min RPKM: 0
Std RPKM: 0
Median RPKM: 0
GTEX-147GR-2826-SM-5RQK8 0.4
GTEX-11DXY-2026-SM-5N9CZ 0.3
GTEX-145MH-2726-SM-5QGQ6 0.3
GTEX-11ONC-1926-SM-5GU75 0.2
GTEX-12ZZX-2726-SM-5N9FT 0.2
GTEX-13PVQ-2726-SM-5L3H7 0.2
GTEX-145LS-2926-SM-5O99G 0.2
GTEX-V955-1726-SM-4JBHF 0.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 1.2
Min RPKM: 0
Std RPKM: 0.2
Median RPKM: 0.4
GTEX-13O21-2426-SM-5MR4A 1.2
GTEX-12BJ1-2126-SM-5BC5O 1.1
GTEX-14DAR-1526-SM-5RQIX 0.9
GTEX-TML8-1326-SM-4DXTO 0.9
GTEX-XPVG-1826-SM-4B64X 0.9
GTEX-11P82-1026-SM-5BC5J 0.8
GTEX-1211K-1726-SM-5FQUJ 0.8
GTEX-133LE-1526-SM-5IFEN 0.8
Show all