NAPRT

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:13.5 FPKM
GTEx:25.9 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA023739

 

Antibody HPA024017

 

Antibody CAB068206

 

Antibody CAB068207

 

Endothelial cells

Medium   Medium   Low   Low  

Glandular cells

High   Medium   Medium   Medium  

Peripheral nerve/ganglion

Low   Not available   Low   Low  
       
       
       

COLON - HPA RNA-seq

? »

Average FPKM

13.5

overview Male, age 54
Sample 1
FPKM: 25.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 17.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 17.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 16.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 11.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

25.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 14.1
Samples: 149

Max RPKM: 26.7
Min RPKM: 3.3
Std RPKM: 4.8
Median RPKM: 13.7
GTEX-V955-1726-SM-4JBHF 26.7
GTEX-X15G-1526-SM-4PQZM 26.2
GTEX-Y5LM-1426-SM-5RQJL 24.9
GTEX-YEC3-2026-SM-4WWFL 24.6
GTEX-WFON-1326-SM-4LVMN 24.4
GTEX-1399U-2226-SM-5KLZI 22.8
GTEX-146FH-2426-SM-5Q5EW 22.7
GTEX-139TS-2226-SM-5J2N1 22.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 37.8
Samples: 196

Max RPKM: 92.2
Min RPKM: 3.7
Std RPKM: 18.8
Median RPKM: 39.8
GTEX-UJHI-1126-SM-4IHLN 92.2
GTEX-1399R-2226-SM-5P9JB 86.7
GTEX-TML8-1326-SM-4DXTO 80.7
GTEX-XUJ4-2026-SM-4BOOW 79.2
GTEX-U3ZN-2126-SM-4DXU1 78.6
GTEX-R55D-1826-SM-48FEF 78.2
GTEX-14E6E-1526-SM-5RQIG 73.1
GTEX-SNOS-1226-SM-4DM5H 69.7
Show all