MSN

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:56.0 FPKM
GTEx:51.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA000263

 

Antibody HPA011135

 

Antibody HPA011227

 

Antibody CAB010898

 

Antibody CAB047338

 

Endothelial cells

Not detected   Medium   Medium   Not detected   Medium  

Glandular cells

Not detected   Not detected   Medium   Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected   Not available   Not available   Medium  
         
         
         

COLON - HPA RNA-seq

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Average FPKM

56.0

overview Male, age 54
Sample 1
FPKM: 30.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 47.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 28.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 37.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 85.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 105.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 57.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

51.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 61.8
Samples: 149

Max RPKM: 160.9
Min RPKM: 31.5
Std RPKM: 20.2
Median RPKM: 57.1
GTEX-13O1R-2426-SM-5KLZZ 160.9
GTEX-11TT1-0926-SM-5GU5M 142.4
GTEX-XAJ8-0726-SM-47JY5 138.2
GTEX-11I78-1326-SM-5PNY9 114.6
GTEX-11WQK-2526-SM-5CVL8 113.0
GTEX-14A5H-1626-SM-5SIAN 111.7
GTEX-12WSJ-1426-SM-5GCON 102.7
GTEX-WI4N-2226-SM-4OOS9 101.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 41.7
Samples: 196

Max RPKM: 144.1
Min RPKM: 6.1
Std RPKM: 26.3
Median RPKM: 32.3
GTEX-14C38-2626-SM-5RQI4 144.1
GTEX-ZYVF-2826-SM-5GIDK 133.6
GTEX-XAJ8-0426-SM-47JYJ 127.0
GTEX-QLQ7-1126-SM-4R1KN 125.1
GTEX-13OVG-1426-SM-5K7VP 121.1
GTEX-13O3P-2326-SM-5KM55 120.8
GTEX-13CF3-1426-SM-5K7YY 104.0
GTEX-13OVJ-1726-SM-5IJDZ 101.6
Show all