H3F3B

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:242.5 FPKM
GTEx:159.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA042570

 

Antibody CAB037166

 

Antibody CAB037187

 

Antibody CAB037221

 

Endothelial cells

High   Medium   High   High  

Glandular cells

High   Medium   Medium   High  

Peripheral nerve/ganglion

High   Not available   Medium   High  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

242.5

overview Male, age 54
Sample 1
FPKM: 255.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 295.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 269.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 256.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 319.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 182.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 118.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

159.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 168.8
Samples: 149

Max RPKM: 1071.2
Min RPKM: 56.9
Std RPKM: 117.8
Median RPKM: 132.1
GTEX-13X6I-2726-SM-5Q5ET 1071.2
GTEX-12ZZW-2426-SM-5DUWE 599.4
GTEX-ZLV1-1326-SM-4WWER 546.0
GTEX-13VXT-2026-SM-5L3EW 473.6
GTEX-ZAB4-2426-SM-5HL8A 440.3
GTEX-13O1R-2426-SM-5KLZZ 396.9
GTEX-146FH-2426-SM-5Q5EW 392.7
GTEX-14BMU-1326-SM-5RQIH 379.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 149.7
Samples: 196

Max RPKM: 1163.5
Min RPKM: 70.3
Std RPKM: 88.9
Median RPKM: 129.5
GTEX-117YW-1826-SM-5PNY5 1163.5
GTEX-UPIC-1726-SM-4IHKG 364.5
GTEX-13OVG-1426-SM-5K7VP 348.2
GTEX-WEY5-1426-SM-4LMJ3 323.5
GTEX-14C38-2626-SM-5RQI4 299.7
GTEX-XYKS-2226-SM-4E3IU 286.8
GTEX-Y114-1526-SM-4TT79 280.3
GTEX-11TT1-1026-SM-5PNW7 271.1
Show all