ASL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:41.1 FPKM
GTEx:15.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA016646

 

Antibody CAB003696

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Low   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

41.1

overview Male, age 54
Sample 1
FPKM: 52.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 44.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 53.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 40.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 36.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 31.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 29.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.4
Samples: 149

Max RPKM: 13.3
Min RPKM: 2.5
Std RPKM: 1.9
Median RPKM: 5.9
GTEX-V955-1726-SM-4JBHF 13.3
GTEX-XBED-1726-SM-47JYO 13.1
GTEX-Y5LM-1426-SM-5RQJL 12.4
GTEX-WFON-1326-SM-4LVMN 12.3
GTEX-11EQ9-1526-SM-5PNY7 11.5
GTEX-13OVJ-1826-SM-5KM2D 11.0
GTEX-11ONC-1926-SM-5GU75 10.5
GTEX-WQUQ-2626-SM-4MVNP 10.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 25.2
Samples: 196

Max RPKM: 60.4
Min RPKM: 3
Std RPKM: 14.5
Median RPKM: 26.7
GTEX-T5JW-1126-SM-4DM5V 60.4
GTEX-R55D-1826-SM-48FEF 55.5
GTEX-U4B1-1126-SM-4DXV3 55.5
GTEX-131XG-1826-SM-5LZV4 53.2
GTEX-PWOO-1326-SM-48TCJ 53.1
GTEX-XMK1-1726-SM-4B64Z 50.9
GTEX-YF7O-1726-SM-5IFJ9 49.9
GTEX-144GM-1226-SM-5LU52 49.3
Show all