RALY

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:83.1 FPKM
GTEx:54.8 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA040971

 

Antibody HPA043614

 

Endothelial cells

Not available   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

Not available   Medium  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

83.1

overview Male, age 54
Sample 1
FPKM: 75.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 88.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 102.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 80.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 80.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 76.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 78.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

54.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 46.3
Samples: 149

Max RPKM: 65.2
Min RPKM: 30.4
Std RPKM: 7.1
Median RPKM: 46.7
GTEX-13PL7-2426-SM-5J2N3 65.2
GTEX-14C5O-2626-SM-5RQI5 65.0
GTEX-ZF28-2526-SM-57WFH 62.4
GTEX-13OW6-2226-SM-5N9FL 62.1
GTEX-139TS-2226-SM-5J2N1 60.8
GTEX-11P81-1426-SM-5P9JN 60.4
GTEX-132NY-2726-SM-5PNY2 57.7
GTEX-1399U-2226-SM-5KLZI 57.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 63.3
Samples: 196

Max RPKM: 110.5
Min RPKM: 29.3
Std RPKM: 15
Median RPKM: 61.7
GTEX-1399R-2226-SM-5P9JB 110.5
GTEX-144GM-1226-SM-5LU52 94.5
GTEX-XV7Q-2126-SM-4BRVX 93.0
GTEX-XMK1-1726-SM-4B64Z 92.8
GTEX-T5JW-1126-SM-4DM5V 89.6
GTEX-139TS-1926-SM-5IJFO 89.1
GTEX-U3ZN-2126-SM-4DXU1 88.4
GTEX-Q2AH-1226-SM-48TZL 88.3
Show all