SOX4

COLON - Expression summary

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RNA expression

HPA:8.6 FPKM
GTEx:5.2 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA029901

 

Endothelial cells

High  

Glandular cells

Low  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

8.6

overview Male, age 54
Sample 1
FPKM: 10.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.9
Samples: 149

Max RPKM: 17.1
Min RPKM: 1.5
Std RPKM: 1.8
Median RPKM: 3.6
GTEX-13X6I-2726-SM-5Q5ET 17.1
GTEX-12ZZW-2426-SM-5DUWE 9.9
GTEX-14A5H-1626-SM-5SIAN 9.7
GTEX-145LS-2926-SM-5O99G 7.8
GTEX-YJ8A-1726-SM-5P9IQ 7.7
GTEX-11PRG-2026-SM-5GU5F 7.5
GTEX-11TT1-0926-SM-5GU5M 7.3
GTEX-ZVZQ-2626-SM-59HLB 6.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 6.5
Samples: 196

Max RPKM: 14.9
Min RPKM: 1.6
Std RPKM: 2.8
Median RPKM: 6
GTEX-117YW-1826-SM-5PNY5 14.9
GTEX-145LT-0926-SM-5LU9C 14.7
GTEX-WFG7-1526-SM-4LVMG 13.9
GTEX-OXRK-1726-SM-3NB16 13.8
GTEX-QDVN-1326-SM-48TZ3 13.8
GTEX-14C38-2626-SM-5RQI4 13.1
GTEX-XPVG-1826-SM-4B64X 12.4
GTEX-ZPIC-2226-SM-57WDX 12.2
Show all