CSTA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.1 FPKM
GTEx:0.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA001031

 

Antibody CAB000469

 

Antibody CAB047315

 

Endothelial cells

Not detected   Not detected   Not detected  

Glandular cells

Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

3.1

overview Male, age 54
Sample 1
FPKM: 2.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 2.3
Min RPKM: 0
Std RPKM: 0.4
Median RPKM: 0.5
GTEX-ZAB4-2426-SM-5HL8A 2.3
GTEX-11TT1-0926-SM-5GU5M 2.1
GTEX-13X6I-2726-SM-5Q5ET 2.0
GTEX-ZV6S-1126-SM-57WE9 2.0
GTEX-WI4N-2226-SM-4OOS9 1.8
GTEX-12ZZW-2426-SM-5DUWE 1.4
GTEX-WFG8-1726-SM-4LVM6 1.4
GTEX-1122O-1426-SM-5H11R 1.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.0
Samples: 196

Max RPKM: 5.6
Min RPKM: 0
Std RPKM: 0.7
Median RPKM: 0.8
GTEX-13W3W-2126-SM-5K7UX 5.6
GTEX-14C38-2626-SM-5RQI4 5.5
GTEX-XQ8I-2126-SM-4BOOM 5.1
GTEX-U3ZN-2126-SM-4DXU1 3.4
GTEX-Q2AH-1226-SM-48TZL 3.3
GTEX-12WSJ-1526-SM-5GCNI 3.1
GTEX-1339X-1626-SM-5IJDN 2.4
GTEX-13OVG-1426-SM-5K7VP 2.4
Show all