CCDC88A

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.7 FPKM
GTEx:2.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA038101

 

Antibody HPA038102

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Low   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

4.7

overview Male, age 54
Sample 1
FPKM: 4.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 3.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.1
Samples: 149

Max RPKM: 5.3
Min RPKM: 1.6
Std RPKM: 0.6
Median RPKM: 3
GTEX-14E6C-2226-SM-5QGQG 5.3
GTEX-YJ8O-1426-SM-5PNV9 5.2
GTEX-12ZZY-2726-SM-5EQ45 4.6
GTEX-117XS-2226-SM-5GIE1 4.4
GTEX-11ZTT-1626-SM-5EQKR 4.4
GTEX-131XG-1526-SM-5GCNQ 4.4
GTEX-ZP4G-1526-SM-57WE5 4.2
GTEX-ZYT6-2826-SM-5GICX 4.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.9
Samples: 196

Max RPKM: 4.9
Min RPKM: 0.3
Std RPKM: 1
Median RPKM: 1.6
GTEX-13FHP-2426-SM-5KLZ5 4.9
GTEX-U3ZH-1326-SM-4DXSF 4.6
GTEX-Z93S-2426-SM-5HL8N 4.4
GTEX-ZXES-1626-SM-5NQ7L 4.4
GTEX-13O3O-2526-SM-5L3DR 4.1
GTEX-111YS-1626-SM-5GZZ9 4.0
GTEX-117YX-0826-SM-5H11J 4.0
GTEX-111VG-2226-SM-5N9DU 3.8
Show all