SGCA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.1 FPKM
GTEx:17.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007537

 

Endothelial cells

Low  

Glandular cells

Low  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

4.1

overview Male, age 54
Sample 1
FPKM: 3.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 4.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

17.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 24.2
Samples: 149

Max RPKM: 52.5
Min RPKM: 5.8
Std RPKM: 9.6
Median RPKM: 23
GTEX-XUJ4-2126-SM-4BOOX 52.5
GTEX-11ZTS-1526-SM-5N9G7 49.1
GTEX-ZDTS-2726-SM-5L3E2 48.4
GTEX-11EMC-1426-SM-5N9E4 45.7
GTEX-139UW-2326-SM-5KM1Y 44.5
GTEX-139TS-2226-SM-5J2N1 44.3
GTEX-131XE-1026-SM-5EGKE 43.1
GTEX-YECK-2826-SM-5IFHF 41.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.8
Samples: 196

Max RPKM: 45.5
Min RPKM: 0.5
Std RPKM: 8.8
Median RPKM: 7.1
GTEX-11GSP-1626-SM-5986N 45.5
GTEX-145ME-0826-SM-5O9AF 35.7
GTEX-RWS6-1826-SM-47JXX 33.3
GTEX-Y3I4-1426-SM-4TT9C 32.3
GTEX-145MO-2426-SM-5NQ9W 32.1
GTEX-13OVI-2026-SM-5J1MU 31.2
GTEX-WEY5-1426-SM-4LMJ3 30.1
GTEX-11ZVC-2126-SM-5EGJ1 29.5
Show all