MAP1LC3A

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:21.1 FPKM
GTEx:29.3 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Not detected
Keratinocytes:Not detected
Langerhans:Not detected
Melanocytes:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007649

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody CAB037174

 

Fibroblasts

Not detected   Not detected   Not detected   Not detected  

Keratinocytes

Not detected   Low   Not detected   Not detected  

Langerhans

Not detected   Not detected   Not detected   Not detected  

Melanocytes

Not detected   Not detected   Not detected   Not detected  
       
       
       

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Not detected
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007649

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody CAB037174

 

Epidermal cells

Low   Low   Not detected   Not detected  
          
          
          
       
       
       

SKIN - HPA RNA-seq

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Average FPKM

21.1

overview Female, age 34
Sample 1
FPKM: 24.0
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 8.5
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 30.7

SKIN - GTEx RNA-seq

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Average RPKM

29.3

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 26.1
Samples: 250

Max RPKM: 70.1
Min RPKM: 6.1
Std RPKM: 9.2
Median RPKM: 25.1
GTEX-ZPCL-1126-SM-4WWFE 70.1
GTEX-WFG7-2026-SM-5SI7P 68.3
GTEX-ZP4G-1426-SM-4WWCL 53.3
GTEX-XBEW-1126-SM-4QARW 51.2
GTEX-ZVZP-1226-SM-5GID7 51.1
GTEX-XPVG-2126-SM-4B667 49.7
GTEX-ZAB4-2126-SM-5HL8U 46.9
GTEX-Y114-2126-SM-4TT8B 46.8
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 32.4
Samples: 357

Max RPKM: 110.5
Min RPKM: 11
Std RPKM: 12.3
Median RPKM: 29.8
GTEX-ZXES-1826-SM-5E43S 110.5
GTEX-1122O-2126-SM-5EGIR 86.9
GTEX-UJHI-1526-SM-3DB99 80.6
GTEX-ZVT2-2526-SM-51MT1 78.2
GTEX-ZGAY-0526-SM-4WWBB 75.5
GTEX-O5YW-0126-SM-3LK6D 73.5
GTEX-13FTW-2626-SM-5K7WL 73.0
GTEX-146FQ-0126-SM-5NQA9 70.8
Show all