MAP1LC3A

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:19.5 FPKM
GTEx:26.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA007649

 

Antibody HPA052474

 

Antibody HPA052484

 

Antibody CAB037174

 

Endothelial cells

Not detected   Not detected   Not detected   Not detected  

Glandular cells

Not detected   Not detected   Low   Low  

Peripheral nerve/ganglion

Low   Not detected   Not detected   Not available  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

19.5

overview Male, age 54
Sample 1
FPKM: 21.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 23.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 25.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 23.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 11.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

26.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 27.6
Samples: 149

Max RPKM: 53.2
Min RPKM: 10.8
Std RPKM: 9.4
Median RPKM: 25.6
GTEX-11DXY-2026-SM-5N9CZ 53.2
GTEX-147JS-2626-SM-5S2UX 50.0
GTEX-145MH-2726-SM-5QGQ6 48.2
GTEX-13OW6-2226-SM-5N9FL 46.2
GTEX-ZE7O-2626-SM-51MSS 46.0
GTEX-ZVT3-2826-SM-5GU6A 46.0
GTEX-11EI6-2626-SM-5PNVT 45.3
GTEX-11ZTS-1526-SM-5N9G7 45.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 25.9
Samples: 196

Max RPKM: 55.4
Min RPKM: 5.2
Std RPKM: 7.9
Median RPKM: 25
GTEX-147JS-2526-SM-5S2Q8 55.4
GTEX-11O72-2226-SM-5PNW2 50.7
GTEX-145MO-2426-SM-5NQ9W 45.2
GTEX-XBEW-1926-SM-4SOJO 45.0
GTEX-UJMC-1326-SM-4IHLS 42.4
GTEX-1399R-2226-SM-5P9JB 42.0
GTEX-XPVG-1826-SM-4B64X 41.7
GTEX-11NSD-1626-SM-5986U 41.6
Show all