DSP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:43.1 FPKM
GTEx:12.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA045840

 

Antibody HPA054950

 

Antibody CAB037324

 

Endothelial cells

Medium   Low   Not detected  

Glandular cells

Medium   Not detected   Not detected  

Peripheral nerve/ganglion

Low   Not detected   Not detected  
     
     

COLON - HPA RNA-seq

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Average FPKM

43.1

overview Male, age 54
Sample 1
FPKM: 41.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 55.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 70.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 48.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 28.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 19.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 37.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

12.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 8
Min RPKM: 0.2
Std RPKM: 1.1
Median RPKM: 1
GTEX-XBED-1726-SM-47JYO 8.0
GTEX-Y5LM-1426-SM-5RQJL 6.6
GTEX-YJ8A-1726-SM-5P9IQ 6.6
GTEX-YEC3-2026-SM-4WWFL 5.8
GTEX-V955-1726-SM-4JBHF 5.6
GTEX-11ONC-1926-SM-5GU75 4.1
GTEX-WFON-1326-SM-4LVMN 3.7
GTEX-11EQ9-1526-SM-5PNY7 3.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 23.1
Samples: 196

Max RPKM: 60.3
Min RPKM: 0.3
Std RPKM: 17.3
Median RPKM: 25.5
GTEX-11EM3-1526-SM-5A5KN 60.3
GTEX-1122O-1526-SM-5N9CL 58.3
GTEX-R55G-1226-SM-48FDC 53.6
GTEX-145MN-1726-SM-5SIA6 51.7
GTEX-14DAR-1526-SM-5RQIX 51.5
GTEX-139T6-1326-SM-5IFFO 51.4
GTEX-131XG-1826-SM-5LZV4 51.3
GTEX-Y5LM-1526-SM-4VDTA 51.1
Show all