CAPN3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.5 FPKM
GTEx:9.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA040052

 

Antibody CAB033438

 

Endothelial cells

Not detected   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

2.5

overview Male, age 54
Sample 1
FPKM: 2.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.6
Samples: 149

Max RPKM: 19.7
Min RPKM: 2.6
Std RPKM: 3.7
Median RPKM: 8
GTEX-14A5I-2426-SM-5Q5CP 19.7
GTEX-1477Z-2126-SM-5Q5CM 18.1
GTEX-ZYY3-2226-SM-5E45A 17.9
GTEX-13OW8-2726-SM-5L3FZ 15.9
GTEX-145LS-2926-SM-5O99G 15.5
GTEX-X15G-1526-SM-4PQZM 15.4
GTEX-13OW6-2226-SM-5N9FL 15.3
GTEX-13X6I-2726-SM-5Q5ET 14.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.4
Samples: 196

Max RPKM: 16.5
Min RPKM: 2.9
Std RPKM: 2.6
Median RPKM: 9.2
GTEX-147JS-2526-SM-5S2Q8 16.5
GTEX-R55D-1826-SM-48FEF 16.5
GTEX-ZLV1-1226-SM-4WWBX 15.9
GTEX-1211K-1726-SM-5FQUJ 14.7
GTEX-13PL7-2526-SM-5IFGR 14.7
GTEX-147F3-1926-SM-5SIB9 14.7
GTEX-XPVG-1826-SM-4B64X 14.7
GTEX-VJYA-2026-SM-4KL1K 14.4
Show all