VIM

SKIN - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:438.5 FPKM
GTEx:310.4 RPKM

SKIN 1 - Immunohistochemistry

? »

Annotated protein
expression

Fibroblasts:High
Keratinocytes:Not detected
Langerhans:High
Melanocytes:High
 

Antibody staining

Antibody HPA001762

 

Antibody CAB000080

 

Antibody CAB058687

 

Fibroblasts

High   High   High  

Keratinocytes

Not detected   Not detected   Not detected  

Langerhans

High   High   High  

Melanocytes

Medium   High   Medium  
     
     
     

SKIN 2 - Immunohistochemistry

? »

Annotated protein
expression

Epidermal cells:Not detected
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001762

 

Antibody CAB000080

 

Antibody CAB058687

 

Epidermal cells

Medium   Not detected   Low  
        
        
        
     
     
     

SKIN - HPA RNA-seq

? »

Average FPKM

438.5

overview Female, age 34
Sample 1
FPKM: 505.4
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 322.2
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 487.8

SKIN - GTEx RNA-seq

? »

Average RPKM

310.4

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 286.0
Samples: 250

Max RPKM: 665.7
Min RPKM: 62.6
Std RPKM: 128.8
Median RPKM: 268
GTEX-ZYW4-0626-SM-59HJR 665.7
GTEX-14BMU-1226-SM-5S2OR 662.7
GTEX-131XE-1626-SM-5K7VO 660.9
GTEX-13113-1626-SM-5EQ4I 624.4
GTEX-YB5K-2026-SM-4VDT3 621.9
GTEX-13QBU-1226-SM-5LU4G 618.8
GTEX-Y3IK-1626-SM-4YCF5 616.9
GTEX-ZVTK-0226-SM-51MRG 603.8
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 334.8
Samples: 357

Max RPKM: 908.8
Min RPKM: 88.8
Std RPKM: 135.5
Median RPKM: 323.5
GTEX-11EMC-2926-SM-5EQ4F 908.8
GTEX-1192X-0226-SM-5H12D 861.9
GTEX-14BIL-0126-SM-5SI92 835.3
GTEX-11TTK-0126-SM-5987B 811.6
GTEX-PLZ4-0126-SM-5SI8O 793.7
GTEX-QDT8-0126-SM-48TZ1 739.0
GTEX-ZUA1-0126-SM-5GU76 654.6
GTEX-SSA3-0126-SM-32QPU 616.1
Show all