BAD

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:24.9 FPKM
GTEx:20.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA028185

 

Antibody HPA062105

 

Antibody CAB004205

 

Endothelial cells

Low   Not detected   Not detected  

Glandular cells

Medium   Not detected   Medium  

Peripheral nerve/ganglion

Medium   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

24.9

overview Male, age 54
Sample 1
FPKM: 40.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 27.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 30.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 35.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 22.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.8
Samples: 149

Max RPKM: 40
Min RPKM: 9.9
Std RPKM: 5.7
Median RPKM: 19.7
GTEX-Z93S-2626-SM-57WBX 40.0
GTEX-ZF28-2526-SM-57WFH 36.2
GTEX-ZPCL-1626-SM-57WGC 35.8
GTEX-1399U-2226-SM-5KLZI 34.6
GTEX-11EI6-2626-SM-5PNVT 33.1
GTEX-1477Z-2126-SM-5Q5CM 31.2
GTEX-139TS-2226-SM-5J2N1 30.7
GTEX-ZG7Y-1826-SM-4WWD3 30.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 19.2
Samples: 196

Max RPKM: 34.5
Min RPKM: 6
Std RPKM: 3.9
Median RPKM: 18.8
GTEX-1399R-2226-SM-5P9JB 34.5
GTEX-WQUQ-2526-SM-4MVNO 32.2
GTEX-Y3IK-1826-SM-4WWDS 30.9
GTEX-13S86-1626-SM-5Q5C5 29.3
GTEX-13111-0726-SM-5DUVE 28.9
GTEX-SNOS-1226-SM-4DM5H 28.9
GTEX-12ZZZ-2426-SM-5GCNN 26.2
GTEX-139TS-1926-SM-5IJFO 25.9
Show all