STRADA

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:8.8 FPKM
GTEx:2.6 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA031637

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Not available  
 
 
 

COLON - HPA RNA-seq

? »

Average FPKM

8.8

overview Male, age 54
Sample 1
FPKM: 7.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 10.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

2.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.9
Samples: 149

Max RPKM: 6.4
Min RPKM: 1.4
Std RPKM: 0.6
Median RPKM: 2.9
GTEX-14E6C-2226-SM-5QGQG 6.4
GTEX-148VJ-2426-SM-5NQ9Y 4.6
GTEX-13QBU-2026-SM-5KLZB 4.3
GTEX-11TUW-2326-SM-5EQMO 4.2
GTEX-13PL7-2426-SM-5J2N3 4.2
GTEX-11EMC-1426-SM-5N9E4 4.0
GTEX-12696-1926-SM-5EGJT 4.0
GTEX-13FHO-2726-SM-5K7VG 4.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.4
Samples: 196

Max RPKM: 4.8
Min RPKM: 0.7
Std RPKM: 0.6
Median RPKM: 2.2
GTEX-11TUW-2026-SM-5EQL8 4.8
GTEX-ZYFC-2626-SM-5NQ6S 4.5
GTEX-X5EB-0926-SM-46MVT 4.3
GTEX-11WQK-2126-SM-5EQME 4.1
GTEX-13O3P-2326-SM-5KM55 4.1
GTEX-YEC4-1926-SM-5IFHJ 4.0
GTEX-13U4I-2426-SM-5LU34 3.9
GTEX-12KS4-2426-SM-5LU8P 3.8
Show all