DDOST

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:119.5 FPKM
GTEx:51.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA046841

 

Antibody HPA052867

 

Antibody CAB009746

 

Endothelial cells

Not detected   Not detected   Medium  

Glandular cells

Medium   High   High  

Peripheral nerve/ganglion

Low   Not detected   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

119.5

overview Male, age 54
Sample 1
FPKM: 128.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 121.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 119.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 71.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 144.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 120.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 130.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

51.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 37.7
Samples: 149

Max RPKM: 77.6
Min RPKM: 25.4
Std RPKM: 6.5
Median RPKM: 37
GTEX-11TT1-0926-SM-5GU5M 77.6
GTEX-132AR-2826-SM-5IJFV 56.5
GTEX-XBED-1726-SM-47JYO 52.0
GTEX-WFG8-1726-SM-4LVM6 49.6
GTEX-WQUQ-2626-SM-4MVNP 49.0
GTEX-1211K-1826-SM-5EGJ2 48.8
GTEX-11EM3-1626-SM-5N9CO 48.7
GTEX-Y5LM-1426-SM-5RQJL 48.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 65.6
Samples: 196

Max RPKM: 152.4
Min RPKM: 16.2
Std RPKM: 23.7
Median RPKM: 63.8
GTEX-QDVN-1326-SM-48TZ3 152.4
GTEX-PWOO-1326-SM-48TCJ 136.3
GTEX-O5YT-1426-SM-3MJHC 120.3
GTEX-Q2AH-1226-SM-48TZL 115.7
GTEX-XMK1-1726-SM-4B64Z 114.9
GTEX-11TT1-1026-SM-5PNW7 112.9
GTEX-144GN-1126-SM-5LU33 112.0
GTEX-XUJ4-2026-SM-4BOOW 110.7
Show all