SMIM1

COLON - Expression summary

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RNA expression

HPA:0.4 FPKM
GTEx:0.8 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA069088

 

Endothelial cells

Not detected  

Glandular cells

Low  

Peripheral nerve/ganglion

Not available  
 
 

COLON - HPA RNA-seq

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Average FPKM

0.4

overview Male, age 54
Sample 1
FPKM: 0.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.0
Samples: 149

Max RPKM: 2.5
Min RPKM: 0.3
Std RPKM: 0.4
Median RPKM: 0.9
GTEX-XV7Q-2226-SM-4BRVY 2.5
GTEX-146FH-2426-SM-5Q5EW 2.3
GTEX-WI4N-2226-SM-4OOS9 2.1
GTEX-ZAB4-2426-SM-5HL8A 2.1
GTEX-1339X-1726-SM-5P9J9 2.0
GTEX-X15G-1526-SM-4PQZM 2.0
GTEX-131XG-1526-SM-5GCNQ 1.9
GTEX-13SLW-2826-SM-5Q5ES 1.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 3.3
Min RPKM: 0
Std RPKM: 0.4
Median RPKM: 0.6
GTEX-11TTK-2426-SM-5PNYO 3.3
GTEX-11WQK-2126-SM-5EQME 1.9
GTEX-14BMV-2426-SM-5S2PP 1.8
GTEX-1339X-1626-SM-5IJDN 1.6
GTEX-147JS-2526-SM-5S2Q8 1.6
GTEX-145MO-2426-SM-5NQ9W 1.5
GTEX-S7SF-1926-SM-4AT5B 1.5
GTEX-145LT-0926-SM-5LU9C 1.4
Show all