C9orf172

COLON - Expression summary

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RNA expression

HPA:1.6 FPKM
GTEx:5.8 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA021200

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

1.6

overview Male, age 54
Sample 1
FPKM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.0
Samples: 149

Max RPKM: 19.8
Min RPKM: 1.8
Std RPKM: 3
Median RPKM: 7.4
GTEX-13PL7-2426-SM-5J2N3 19.8
GTEX-XUJ4-2126-SM-4BOOX 17.9
GTEX-131XE-1026-SM-5EGKE 15.9
GTEX-X15G-1526-SM-4PQZM 15.9
GTEX-139TS-2226-SM-5J2N1 15.7
GTEX-13OW5-2826-SM-5KM1G 14.4
GTEX-XQ8I-2326-SM-4BOQC 14.3
GTEX-ZAJG-2626-SM-5S2NU 13.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.7
Samples: 196

Max RPKM: 17.3
Min RPKM: 0.2
Std RPKM: 2.9
Median RPKM: 2.9
GTEX-11GSP-1626-SM-5986N 17.3
GTEX-RWS6-1826-SM-47JXX 14.0
GTEX-11TUW-2026-SM-5EQL8 11.7
GTEX-TKQ1-0626-SM-4DXTS 11.1
GTEX-X5EB-0926-SM-46MVT 11.1
GTEX-145MO-2426-SM-5NQ9W 10.3
GTEX-13OW5-2626-SM-5MR3M 10.2
GTEX-S341-1426-SM-4AD6U 10.2
Show all