LTB

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.6 FPKM
GTEx:2.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA048884

 

Endothelial cells

Not detected  

Glandular cells

Low  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

6.6

overview Male, age 54
Sample 1
FPKM: 4.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 20.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.9
Samples: 149

Max RPKM: 12.4
Min RPKM: 0
Std RPKM: 1.5
Median RPKM: 0.5
GTEX-13X6K-2726-SM-5O9DG 12.4
GTEX-146FH-2426-SM-5Q5EW 11.1
GTEX-ZC5H-2426-SM-4WAZ6 6.8
GTEX-YJ8A-1726-SM-5P9IQ 6.1
GTEX-11PRG-2026-SM-5GU5F 5.1
GTEX-WQUQ-2626-SM-4MVNP 4.3
GTEX-11ONC-1926-SM-5GU75 3.2
GTEX-13OW6-2226-SM-5N9FL 2.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.0
Samples: 196

Max RPKM: 37.9
Min RPKM: 0
Std RPKM: 5.8
Median RPKM: 1.6
GTEX-147JS-2526-SM-5S2Q8 37.9
GTEX-11NSD-1626-SM-5986U 32.4
GTEX-R53T-1326-SM-48FCQ 30.5
GTEX-WHWD-1226-SM-4OOS1 25.5
GTEX-PX3G-1426-SM-48U1J 24.0
GTEX-P78B-1726-SM-3P5ZV 22.2
GTEX-1399R-2226-SM-5P9JB 20.8
GTEX-XMK1-1726-SM-4B64Z 19.7
Show all