ATXN2

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.3 FPKM
GTEx:5.7 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Low
Langerhans:Not detected
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA018295

 

Antibody HPA020339

 

Antibody HPA021146

 

Fibroblasts

Not detected   Medium   Medium  

Keratinocytes

Not detected   Low   Low  

Langerhans

Not detected   Low   Not detected  

Melanocytes

Not detected   Low   Medium  
     
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA018295

 

Antibody HPA020339

 

Antibody HPA021146

 

Epidermal cells

Low   Medium   Medium  
        
        
        
     
     
     

SKIN - HPA RNA-seq

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Average FPKM

7.3

overview Female, age 34
Sample 1
FPKM: 7.3
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 8.1
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 6.3

SKIN - GTEx RNA-seq

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Average RPKM

5.7

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 5.4
Samples: 250

Max RPKM: 10.1
Min RPKM: 2.1
Std RPKM: 1.6
Median RPKM: 5.3
GTEX-11WQK-1026-SM-5EQLX 10.1
GTEX-13N2G-0226-SM-5K7VF 9.6
GTEX-1314G-1326-SM-5BC6E 9.0
GTEX-139D8-1126-SM-5LU8W 9.0
GTEX-13JUV-2026-SM-5K7UA 9.0
GTEX-Y5V5-0126-SM-5S2NW 9.0
GTEX-ZWKS-0626-SM-5GIDV 9.0
GTEX-13NZ9-2626-SM-5L3FK 8.9
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 5.9
Samples: 357

Max RPKM: 10.8
Min RPKM: 2
Std RPKM: 1.4
Median RPKM: 5.8
GTEX-11WQK-0526-SM-5EQLD 10.8
GTEX-ZZPT-0226-SM-5E43X 10.6
GTEX-SNMC-1226-SM-2XCFP 10.1
GTEX-11DXY-2626-SM-5GIE7 9.5
GTEX-X62O-0126-SM-4E3JN 9.4
GTEX-ZAB5-1826-SM-5HL7C 9.4
GTEX-11NSD-2226-SM-5986V 9.3
GTEX-139T4-0226-SM-5HL5S 9.1
Show all