ATXN2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:9.3 FPKM
GTEx:8.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA018295

 

Antibody HPA020339

 

Antibody HPA021146

 

Endothelial cells

Low   Not detected   Medium  

Glandular cells

Low   Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

9.3

overview Male, age 54
Sample 1
FPKM: 9.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.9
Samples: 149

Max RPKM: 15.1
Min RPKM: 5.3
Std RPKM: 1.9
Median RPKM: 9.8
GTEX-11WQK-2526-SM-5CVL8 15.1
GTEX-13OW6-2226-SM-5N9FL 14.1
GTEX-147JS-2626-SM-5S2UX 13.8
GTEX-13OW8-2726-SM-5L3FZ 13.7
GTEX-1212Z-1826-SM-5FQSH 13.6
GTEX-11ONC-1926-SM-5GU75 13.5
GTEX-13OW5-2826-SM-5KM1G 13.5
GTEX-14E6C-2226-SM-5QGQG 13.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 7.6
Samples: 196

Max RPKM: 16.5
Min RPKM: 3.3
Std RPKM: 2.1
Median RPKM: 7.2
GTEX-ZYVF-2826-SM-5GIDK 16.5
GTEX-11WQK-2126-SM-5EQME 15.8
GTEX-13O3P-2326-SM-5KM55 14.1
GTEX-12KS4-2426-SM-5LU8P 13.1
GTEX-11ONC-2026-SM-5HL61 12.9
GTEX-147JS-2526-SM-5S2Q8 12.9
GTEX-ZYFC-2626-SM-5NQ6S 12.6
GTEX-11TUW-2026-SM-5EQL8 12.0
Show all