NAGA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:20.1 FPKM
GTEx:9.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA000649

 

Endothelial cells

Medium  

Glandular cells

Low  

Peripheral nerve/ganglion

Not available  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

20.1

overview Male, age 54
Sample 1
FPKM: 19.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 22.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 12.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 26.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 19.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 21.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.2
Samples: 149

Max RPKM: 13.1
Min RPKM: 3.4
Std RPKM: 1.6
Median RPKM: 7.3
GTEX-WFON-1326-SM-4LVMN 13.1
GTEX-YEC3-2026-SM-4WWFL 12.6
GTEX-XBED-1726-SM-47JYO 11.2
GTEX-11TT1-0926-SM-5GU5M 10.1
GTEX-1211K-1826-SM-5EGJ2 9.9
GTEX-132NY-2726-SM-5PNY2 9.9
GTEX-11ZTT-1626-SM-5EQKR 9.7
GTEX-XV7Q-2226-SM-4BRVY 9.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 11.6
Samples: 196

Max RPKM: 19.2
Min RPKM: 3
Std RPKM: 3.3
Median RPKM: 11.2
GTEX-O5YT-1426-SM-3MJHC 19.2
GTEX-ZV7C-1526-SM-5NQ72 19.1
GTEX-Q2AI-0926-SM-48U1F 19.0
GTEX-WFON-1426-SM-4LVMT 18.5
GTEX-ZVT2-1926-SM-5GU5T 18.3
GTEX-ZLV1-1226-SM-4WWBX 18.2
GTEX-131XG-1826-SM-5LZV4 18.1
GTEX-1122O-1526-SM-5N9CL 18.0
Show all