SOWAHA

COLON - Expression summary

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RNA expression

HPA:7.2 FPKM
GTEx:2.5 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA064621

 

Endothelial cells

Not detected  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

7.2

overview Male, age 54
Sample 1
FPKM: 9.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 12.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 2.4
Min RPKM: 0
Std RPKM: 0.2
Median RPKM: 0
GTEX-YEC3-2026-SM-4WWFL 2.4
GTEX-XBED-1726-SM-47JYO 1.0
GTEX-YJ8A-1726-SM-5P9IQ 1.0
GTEX-V955-1726-SM-4JBHF 0.8
GTEX-WQUQ-2626-SM-4MVNP 0.7
GTEX-Y5LM-1426-SM-5RQJL 0.6
GTEX-11ONC-1926-SM-5GU75 0.4
GTEX-ZPCL-1626-SM-57WGC 0.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.9
Samples: 196

Max RPKM: 20.3
Min RPKM: 0
Std RPKM: 4.4
Median RPKM: 4.2
GTEX-14E6E-1526-SM-5RQIG 20.3
GTEX-1122O-1526-SM-5N9CL 18.8
GTEX-WOFM-2026-SM-4OOSQ 16.9
GTEX-R55G-1226-SM-48FDC 16.1
GTEX-12BJ1-2126-SM-5BC5O 14.7
GTEX-11P82-1026-SM-5BC5J 14.2
GTEX-R55D-1826-SM-48FEF 13.8
GTEX-XUZC-1326-SM-4BRV2 13.1
Show all