TYW1

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:7.0 FPKM
GTEx:5.2 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA013568

 

Antibody HPA015535

 

Antibody HPA043136

 

Antibody HPA047029

 

Antibody HPA047052

 

Endothelial cells

Not detected   Low   Low   Low   Not detected  

Glandular cells

Medium   Low   Medium   Medium   Medium  

Peripheral nerve/ganglion

Not available   Low   Medium   Not available   Not available  
         
         
         

COLON - HPA RNA-seq

? »

Average FPKM

7.0

overview Male, age 54
Sample 1
FPKM: 6.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

5.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.9
Samples: 149

Max RPKM: 7.9
Min RPKM: 2.5
Std RPKM: 0.7
Median RPKM: 4.9
GTEX-11WQK-2526-SM-5CVL8 7.9
GTEX-Y9LG-1326-SM-4VBQB 7.4
GTEX-131XG-1526-SM-5GCNQ 7.0
GTEX-13X6K-2726-SM-5O9DG 6.6
GTEX-12ZZY-2726-SM-5EQ45 6.3
GTEX-WYVS-1126-SM-4SOJX 6.2
GTEX-13OW8-2726-SM-5L3FZ 6.1
GTEX-13SLW-2826-SM-5Q5ES 6.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.5
Samples: 196

Max RPKM: 8.4
Min RPKM: 2.6
Std RPKM: 0.8
Median RPKM: 5.4
GTEX-R53T-1326-SM-48FCQ 8.4
GTEX-PWN1-1426-SM-48TDF 8.3
GTEX-U4B1-1126-SM-4DXV3 7.6
GTEX-QCQG-1626-SM-48U26 7.5
GTEX-TML8-1326-SM-4DXTO 7.5
GTEX-133LE-1526-SM-5IFEN 7.2
GTEX-WFG7-1526-SM-4LVMG 7.2
GTEX-12KS4-2426-SM-5LU8P 7.1
Show all