NPIP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.4 FPKM
GTEx:1.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA053611

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

High  
 
 

COLON - HPA RNA-seq

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Average FPKM

7.4

overview Male, age 54
Sample 1
FPKM: 7.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 4.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.1
Samples: 149

Max RPKM: 3
Min RPKM: 0.2
Std RPKM: 0.6
Median RPKM: 0.9
GTEX-ZVT4-2626-SM-5N9GJ 3.0
GTEX-11DXY-2026-SM-5N9CZ 2.9
GTEX-13X6K-2726-SM-5O9DG 2.9
GTEX-13OW6-2226-SM-5N9FL 2.7
GTEX-13PL7-2426-SM-5J2N3 2.7
GTEX-139TS-2226-SM-5J2N1 2.6
GTEX-13PVQ-2726-SM-5L3H7 2.6
GTEX-V955-1726-SM-4JBHF 2.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.1
Samples: 196

Max RPKM: 3.6
Min RPKM: 0.2
Std RPKM: 0.5
Median RPKM: 1
GTEX-13O3O-2526-SM-5L3DR 3.6
GTEX-13OVJ-1726-SM-5IJDZ 3.5
GTEX-147JS-2526-SM-5S2Q8 2.8
GTEX-11O72-2226-SM-5PNW2 2.4
GTEX-12KS4-2426-SM-5LU8P 2.4
GTEX-13O3P-2326-SM-5KM55 2.2
GTEX-QEL4-1926-SM-4R1JI 2.2
GTEX-13FHP-2426-SM-5KLZ5 2.1
Show all