MARCH5

COLON - Expression summary

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RNA expression

HPA:8.4 FPKM
GTEx:7.0 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA052901

 

Endothelial cells

Not detected  

Glandular cells

Low  

Peripheral nerve/ganglion

High  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

8.4

overview Male, age 54
Sample 1
FPKM: 8.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

7.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.0
Samples: 149

Max RPKM: 15.4
Min RPKM: 4.4
Std RPKM: 1.4
Median RPKM: 6.8
GTEX-11WQK-2526-SM-5CVL8 15.4
GTEX-13X6I-2726-SM-5Q5ET 11.9
GTEX-145ME-1126-SM-5SIAT 11.0
GTEX-ZVT4-2626-SM-5N9GJ 10.9
GTEX-148VJ-2426-SM-5NQ9Y 10.7
GTEX-14E6C-2226-SM-5QGQG 10.0
GTEX-13OW5-2826-SM-5KM1G 9.6
GTEX-ZAJG-2626-SM-5S2NU 9.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 7.0
Samples: 196

Max RPKM: 14.3
Min RPKM: 4.6
Std RPKM: 1.2
Median RPKM: 6.9
GTEX-11WQK-2126-SM-5EQME 14.3
GTEX-14C38-2626-SM-5RQI4 12.2
GTEX-13O3P-2326-SM-5KM55 10.5
GTEX-ZYVF-2826-SM-5GIDK 10.0
GTEX-V955-1626-SM-4JBHJ 9.7
GTEX-148VJ-2626-SM-5QGPI 9.3
GTEX-XXEK-1926-SM-4BRVD 9.2
GTEX-11P82-1026-SM-5BC5J 9.1
Show all