PSAP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:381.8 FPKM
GTEx:284.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA004426

 

Antibody CAB004647

 

Endothelial cells

Medium   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

Not available   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

381.8

overview Male, age 54
Sample 1
FPKM: 350.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 412.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 289.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 247.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 637.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 372.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 362.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

284.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 278.1
Samples: 149

Max RPKM: 422
Min RPKM: 167.9
Std RPKM: 50.7
Median RPKM: 270.3
GTEX-WFON-1326-SM-4LVMN 422.0
GTEX-13SLW-2826-SM-5Q5ES 415.2
GTEX-13OVJ-1826-SM-5KM2D 411.7
GTEX-ZAB4-2426-SM-5HL8A 402.4
GTEX-132NY-2726-SM-5PNY2 402.2
GTEX-YEC3-2026-SM-4WWFL 394.0
GTEX-11P81-1426-SM-5P9JN 385.2
GTEX-12ZZW-2426-SM-5DUWE 383.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 291.5
Samples: 196

Max RPKM: 829.1
Min RPKM: 166.2
Std RPKM: 74.6
Median RPKM: 282
GTEX-ZXES-1626-SM-5NQ7L 829.1
GTEX-Q2AH-1226-SM-48TZL 571.7
GTEX-1339X-1626-SM-5IJDN 521.6
GTEX-14C38-2626-SM-5RQI4 469.2
GTEX-14BMV-2426-SM-5S2PP 445.6
GTEX-11EM3-1526-SM-5A5KN 435.1
GTEX-11TTK-2426-SM-5PNYO 427.4
GTEX-145ME-0826-SM-5O9AF 422.2
Show all