Splice variant |
Ensembl |
UniProt |
Protein class |
Gene ontology |
Length (aa) |
Molecular mass (kDa) |
Signal peptide (predicted) |
Transmembrane regions (predicted)
|
COL13A1-001 |
ENSP00000381949
ENST00000398978
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Q5TAT6 Show all »
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Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain A0A024QZL3 [Target identity:73%; Query identity:100%]Collagen, type XIII, alpha 1, isoform CRA_k {ECO:0000313|EMBL:EAW54370.1} Q9UP45 [Target identity:13%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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717 |
69.9 |
No |
1 |
COL13A1-002 |
ENSP00000346553
ENST00000354547
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Q5TAT6 Show all »
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Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain A0A024QZP5 [Target identity:69%; Query identity:100%]Collagen, type XIII, alpha 1, isoform CRA_l {ECO:0000313|EMBL:EAW54348.1} Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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695 |
67.4 |
No |
1 |
COL13A1-004 |
ENSP00000350463
ENST00000357811
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Q5TAT6 Show all »
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Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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683 |
66.4 |
No |
1 |
COL13A1-006 |
ENSP00000381947
ENST00000398975
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Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014)
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|
247 |
23.2 |
No |
0 |
COL13A1-008 |
ENSP00000388774
ENST00000456019
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Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014)
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|
174 |
16.4 |
No |
0 |
COL13A1-011 |
ENSP00000428057
ENST00000520267
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Q5TAT6 Show all »
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Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:15%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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645 |
63 |
No |
1 |
COL13A1-013 |
ENSP00000430061
ENST00000517713
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Q5TAT6 Show all »
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Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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668 |
65 |
No |
1 |
COL13A1-014 |
ENSP00000428342
ENST00000522165
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Q5TAT6 Show all »
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Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
|
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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686 |
66.9 |
No |
1 |
COL13A1-015 |
ENSP00000430173
ENST00000520133
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Q5TAT6 Show all »
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Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:16%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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|
610 |
59.5 |
No |
1 |
COL13A1-201 |
ENSP00000381941
ENST00000398969
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Q9UP45 Show all »
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Q9UP45 [Target identity:15%; Query identity:100%]Type XIII collagen {ECO:0000313|EMBL:AAD48082.1}
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Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014)
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642 |
62.8 |
No |
1 |