COL13A1

GENE INFORMATION

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Gene name

COL13A1

Synonyms

Description

Collagen, type XIII, alpha 1 (HGNC Symbol)

Entrez gene summary

This gene encodes the alpha chain of one of the nonfibrillar collagens. The function of this gene product is not known, however, it has been detected at low levels in all connective tissue-producing cells so it may serve a general function in connective tissues. Unlike most of the collagens, which are secreted into the extracellular matrix, collagen XIII contains a transmembrane domain and the protein has been localized to the plasma membrane. The transcripts for this gene undergo complex and extensive splicing involving at least eight exons. Like other collagens, collagen XIII is a trimer; it is not known whether this trimer is composed of one or more than one alpha chain isomer. A number of alternatively spliced transcript variants have been described, but the full length nature of some of them has not been determined. [provided by RefSeq, Jul 2008]

Chromosome

10

Cytoband

q22.1

Chromosome location (bp)

69801931 - 69964275

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000197467 (version 78.38)

Entrez gene

1305

UniProt

Q5TAT6 (UniProt - Evidence at protein level)

neXtProt

NX_Q5TAT6

Antibodypedia

COL13A1 antibodies
 

PROTEIN VIEW

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COL13A1-001
 
COL13A1-002
 
COL13A1-004
 
COL13A1-006
 
COL13A1-008
 
COL13A1-011
 
COL13A1-013
 
COL13A1-014
 
COL13A1-015
 
COL13A1-201
 
 
 
 
 

PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

COL13A1-001 ENSP00000381949
ENST00000398978
Q5TAT6
Show all »
Show » Show » 717 69.9 No 1
COL13A1-002 ENSP00000346553
ENST00000354547
Q5TAT6
Show all »
Show » Show » 695 67.4 No 1
COL13A1-004 ENSP00000350463
ENST00000357811
Q5TAT6
Show all »
Show » Show » 683 66.4 No 1
COL13A1-006 ENSP00000381947
ENST00000398975
Show » 247 23.2 No 0
COL13A1-008 ENSP00000388774
ENST00000456019
Show » 174 16.4 No 0
COL13A1-011 ENSP00000428057
ENST00000520267
Q5TAT6
Show all »
Show » Show » 645 63 No 1
COL13A1-013 ENSP00000430061
ENST00000517713
Q5TAT6
Show all »
Show » Show » 668 65 No 1
COL13A1-014 ENSP00000428342
ENST00000522165
Q5TAT6
Show all »
Show » Show » 686 66.9 No 1
COL13A1-015 ENSP00000430173
ENST00000520133
Q5TAT6
Show all »
Show » Show » 610 59.5 No 1
COL13A1-201 ENSP00000381941
ENST00000398969
Q9UP45
Show all »
Show » 642 62.8 No 1