SRC

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:18.5 FPKM
GTEx:17.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA030875

 

Antibody CAB004023

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

18.5

overview Male, age 54
Sample 1
FPKM: 28.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 25.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 17.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 17.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

17.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 15.8
Samples: 149

Max RPKM: 24.8
Min RPKM: 9.2
Std RPKM: 2.9
Median RPKM: 15.5
GTEX-12WSM-1426-SM-5GCPA 24.8
GTEX-XUJ4-2126-SM-4BOOX 23.4
GTEX-13O1R-2426-SM-5KLZZ 23.0
GTEX-13PVQ-2726-SM-5L3H7 22.9
GTEX-11TUW-2326-SM-5EQMO 22.6
GTEX-11ONC-1926-SM-5GU75 22.0
GTEX-ZVT4-2626-SM-5N9GJ 21.8
GTEX-XUW1-1826-SM-4BOQD 21.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.4
Samples: 196

Max RPKM: 30.9
Min RPKM: 2.9
Std RPKM: 4.6
Median RPKM: 18.6
GTEX-132AR-2726-SM-5PNVN 30.9
GTEX-ZLV1-1226-SM-4WWBX 29.4
GTEX-UJMC-1326-SM-4IHLS 28.8
GTEX-XQ8I-2126-SM-4BOOM 28.0
GTEX-1399S-1926-SM-5J2M5 27.5
GTEX-PWOO-1326-SM-48TCJ 27.2
GTEX-UJHI-1126-SM-4IHLN 27.2
GTEX-Y5LM-1526-SM-4VDTA 27.2
Show all