IARS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:28.3 FPKM
GTEx:13.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA029806

 

Endothelial cells

Medium  

Glandular cells

Not detected  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

28.3

overview Male, age 54
Sample 1
FPKM: 19.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 28.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 29.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 29.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 37.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 39.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

13.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 13.8
Samples: 149

Max RPKM: 32.2
Min RPKM: 7.1
Std RPKM: 3.9
Median RPKM: 13
GTEX-13O1R-2426-SM-5KLZZ 32.2
GTEX-11TT1-0926-SM-5GU5M 31.8
GTEX-14A5H-1626-SM-5SIAN 24.1
GTEX-ZTTD-2626-SM-57WEX 24.0
GTEX-11WQK-2526-SM-5CVL8 23.3
GTEX-11I78-1326-SM-5PNY9 20.9
GTEX-14E6C-2226-SM-5QGQG 20.9
GTEX-XAJ8-0726-SM-47JY5 20.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.4
Samples: 196

Max RPKM: 37.7
Min RPKM: 4
Std RPKM: 4.6
Median RPKM: 12.4
GTEX-11TT1-1026-SM-5PNW7 37.7
GTEX-XYKS-2226-SM-4E3IU 34.0
GTEX-VJYA-2026-SM-4KL1K 32.6
GTEX-PWOO-1326-SM-48TCJ 30.7
GTEX-O5YT-1426-SM-3MJHC 24.7
GTEX-11TUW-2026-SM-5EQL8 24.4
GTEX-13W3W-2126-SM-5K7UX 23.6
GTEX-XAJ8-0426-SM-47JYJ 23.3
Show all