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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:153.1 FPKM
GTEx:139.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA043640

 

Antibody HPA046280

 

Antibody CAB005417

 

Antibody CAB012406

 

Endothelial cells

Medium   Medium   Medium   High  

Glandular cells

Medium   Medium   Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium   Medium   High  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

153.1

overview Male, age 54
Sample 1
FPKM: 99.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 111.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 121.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 75.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 136.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 292.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 234.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

139.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 153.9
Samples: 149

Max RPKM: 327.1
Min RPKM: 70.8
Std RPKM: 43.4
Median RPKM: 147.3
GTEX-11TT1-0926-SM-5GU5M 327.1
GTEX-11WQK-2526-SM-5CVL8 286.5
GTEX-YJ8A-1726-SM-5P9IQ 268.4
GTEX-13CF3-1326-SM-5LZXZ 259.6
GTEX-131XG-1526-SM-5GCNQ 242.1
GTEX-11P81-1426-SM-5P9JN 234.0
GTEX-11EM3-1626-SM-5N9CO 231.5
GTEX-14A5H-1626-SM-5SIAN 231.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 125.6
Samples: 196

Max RPKM: 325.5
Min RPKM: 32
Std RPKM: 55.6
Median RPKM: 116.5
GTEX-XAJ8-0426-SM-47JYJ 325.5
GTEX-ZYVF-2826-SM-5GIDK 313.3
GTEX-O5YT-1426-SM-3MJHC 303.9
GTEX-QLQ7-1126-SM-4R1KN 280.9
GTEX-QDVN-1326-SM-48TZ3 254.5
GTEX-U3ZH-1326-SM-4DXSF 244.3
GTEX-QDVJ-1326-SM-48U1X 230.6
GTEX-11GSP-1626-SM-5986N 223.8
Show all