LRRK2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:1.5 FPKM
GTEx:2.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA014293

 

Antibody CAB037160

 

Endothelial cells

Not detected   Medium  

Glandular cells

Not detected   High  

Peripheral nerve/ganglion

Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

1.5

overview Male, age 54
Sample 1
FPKM: 1.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.2
Samples: 149

Max RPKM: 5.6
Min RPKM: 1.2
Std RPKM: 0.9
Median RPKM: 3.2
GTEX-ZVT4-2626-SM-5N9GJ 5.6
GTEX-13SLW-2826-SM-5Q5ES 5.3
GTEX-WFON-1326-SM-4LVMN 5.3
GTEX-ZAB4-2426-SM-5HL8A 5.2
GTEX-13N2G-2226-SM-5IJCU 5.1
GTEX-145LS-2926-SM-5O99G 5.1
GTEX-WYVS-1126-SM-4SOJX 4.9
GTEX-117XS-2226-SM-5GIE1 4.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.7
Samples: 196

Max RPKM: 6
Min RPKM: 0.1
Std RPKM: 1.3
Median RPKM: 1.3
GTEX-U3ZH-1326-SM-4DXSF 6.0
GTEX-11P81-1126-SM-5GU5G 5.2
GTEX-14C38-2626-SM-5RQI4 4.9
GTEX-S341-1426-SM-4AD6U 4.9
GTEX-12ZZZ-2426-SM-5GCNN 4.8
GTEX-11TTK-2426-SM-5PNYO 4.7
GTEX-11ONC-2026-SM-5HL61 4.6
GTEX-111YS-1626-SM-5GZZ9 4.3
Show all