BCDIN3D

COLON - Expression summary

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RNA expression

HPA:1.7 FPKM
GTEx:3.1 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA039911

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Low  
 
 

COLON - HPA RNA-seq

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Average FPKM

1.7

overview Male, age 54
Sample 1
FPKM: 1.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.2
Samples: 149

Max RPKM: 6.2
Min RPKM: 1
Std RPKM: 0.9
Median RPKM: 3.1
GTEX-132AR-2826-SM-5IJFV 6.2
GTEX-ZAJG-2626-SM-5S2NU 5.6
GTEX-146FH-2426-SM-5Q5EW 5.3
GTEX-XV7Q-2226-SM-4BRVY 5.3
GTEX-ZAB5-1426-SM-5HL9D 5.3
GTEX-XXEK-1826-SM-4BRVC 4.9
GTEX-147GR-2826-SM-5RQK8 4.7
GTEX-WHWD-1526-SM-4OORV 4.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.1
Samples: 196

Max RPKM: 5.6
Min RPKM: 0.3
Std RPKM: 0.7
Median RPKM: 3
GTEX-OXRK-1726-SM-3NB16 5.6
GTEX-V955-1626-SM-4JBHJ 5.1
GTEX-11NSD-1626-SM-5986U 4.8
GTEX-XXEK-1926-SM-4BRVD 4.7
GTEX-132AR-2726-SM-5PNVN 4.5
GTEX-1339X-1626-SM-5IJDN 4.5
GTEX-QLQ7-1126-SM-4R1KN 4.4
GTEX-S341-1426-SM-4AD6U 4.4
Show all