H1FX

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:33.2 FPKM
GTEx:86.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA040099

 

Antibody CAB012235

 

Endothelial cells

Medium   High  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

33.2

overview Male, age 54
Sample 1
FPKM: 42.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 39.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 29.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 48.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 55.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

86.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 90.7
Samples: 149

Max RPKM: 744.5
Min RPKM: 20.6
Std RPKM: 67.2
Median RPKM: 74
GTEX-13X6I-2726-SM-5Q5ET 744.5
GTEX-12ZZW-2426-SM-5DUWE 262.5
GTEX-ZAB4-2426-SM-5HL8A 255.7
GTEX-X15G-1526-SM-4PQZM 244.1
GTEX-ZLV1-1326-SM-4WWER 229.7
GTEX-WI4N-2226-SM-4OOS9 205.8
GTEX-Y114-1626-SM-4TT7I 178.8
GTEX-146FH-2426-SM-5Q5EW 154.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 82.5
Samples: 196

Max RPKM: 553.6
Min RPKM: 24.7
Std RPKM: 47.4
Median RPKM: 71.9
GTEX-117YW-1826-SM-5PNY5 553.6
GTEX-14C38-2626-SM-5RQI4 231.5
GTEX-UPIC-1726-SM-4IHKG 207.7
GTEX-QDVN-1326-SM-48TZ3 203.3
GTEX-13O3O-2526-SM-5L3DR 192.0
GTEX-T5JW-1126-SM-4DM5V 191.1
GTEX-S4Q7-0826-SM-4AD5E 155.1
GTEX-Y114-1526-SM-4TT79 154.0
Show all