AFMID

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.9 FPKM
GTEx:4.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA023861

 

Antibody HPA026536

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

10.9

overview Male, age 54
Sample 1
FPKM: 11.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 11.5
Min RPKM: 0.7
Std RPKM: 1.4
Median RPKM: 2.3
GTEX-13X6I-2726-SM-5Q5ET 11.5
GTEX-YEC3-2026-SM-4WWFL 6.9
GTEX-13OVJ-1826-SM-5KM2D 6.1
GTEX-148VJ-2426-SM-5NQ9Y 6.0
GTEX-13SLW-2826-SM-5Q5ES 5.6
GTEX-ZYY3-2226-SM-5E45A 5.5
GTEX-WI4N-2226-SM-4OOS9 5.4
GTEX-13FHO-2726-SM-5K7VG 5.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.3
Samples: 196

Max RPKM: 13.1
Min RPKM: 1.1
Std RPKM: 2
Median RPKM: 5.5
GTEX-145MN-1726-SM-5SIA6 13.1
GTEX-XUJ4-2026-SM-4BOOW 10.8
GTEX-XV7Q-2126-SM-4BRVX 9.8
GTEX-11P7K-1526-SM-5EGI7 9.4
GTEX-PWOO-1326-SM-48TCJ 9.4
GTEX-O5YT-1426-SM-3MJHC 9.2
GTEX-145LT-0926-SM-5LU9C 9.1
GTEX-UJMC-1326-SM-4IHLS 8.9
Show all