OGFOD3

GENERAL INFORMATION

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Gene name

OGFOD3

Gene description

2-oxoglutarate and iron-dependent oxygenase domain containing 3

Protein class

Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

Intracellular,Membrane

Number of transcripts

6
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

Strong luminal membranous and cytoplasmic positivity was displayed in intestinal glands. Neuropil, stomach, hepatocytes, adrenal gland, parathyroid gland, renal tubules, placenta, testis, hematopoietic cells and heart myocytes exhibited moderate cytoplasmic positivity with additional or membranous staining in some of the tissues. Remaining normal tissues were weakly stained or negative.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 1 antibody.
HPA052099
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

OGFOD3 (HGNC Symbol)

Synonyms

C17orf101, FLJ22222

Description

2-oxoglutarate and iron-dependent oxygenase domain containing 3 (HGNC Symbol)

Entrez gene summary

Chromosome

17

Cytoband

q25.3

Chromosome location (bp)

82389223 - 82418637

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000181396 (version 78.38)

Entrez gene

79701

UniProt

Q6PK18 (UniProt - Evidence at protein level)

neXtProt

NX_Q6PK18

Antibodypedia

OGFOD3 antibodies


PROTEIN BROWSER

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ENST00000313056
 
ENST00000329197
 
ENST00000577495
 
ENST00000582593
 
ENST00000583445
 
ENST00000583897
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

OGFOD3-001 ENSP00000320116
ENST00000313056
Q6PK18
Show all »
Show » Show » 319 35.6 No 1
OGFOD3-003 ENSP00000330075
ENST00000329197
Q6PK18
Show all »
Show » Show » 331 36.6 No 1
OGFOD3-006 ENSP00000466184
ENST00000577495
Show » 15 1.7 No 0
OGFOD3-008 ENSP00000464195
ENST00000583897
Show » Show » 241 27.2 No 0
OGFOD3-009 ENSP00000467074
ENST00000583445
Show » 219 25.2 No 0
OGFOD3-010 ENSP00000466117
ENST00000582593
Show » 95 10.5 No 0