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COLON - Expression summary

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RNA expression

HPA:8.2 FPKM
GTEx:6.2 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA048599

 

Endothelial cells

High  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

8.2

overview Male, age 54
Sample 1
FPKM: 7.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 24.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

6.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.3
Samples: 149

Max RPKM: 17.9
Min RPKM: 2.3
Std RPKM: 2.9
Median RPKM: 5.6
GTEX-ZTTD-2626-SM-57WEX 17.9
GTEX-14A5H-1626-SM-5SIAN 17.0
GTEX-12WSJ-1426-SM-5GCON 15.9
GTEX-11TT1-0926-SM-5GU5M 15.2
GTEX-13O1R-2426-SM-5KLZZ 14.2
GTEX-WQUQ-2626-SM-4MVNP 14.1
GTEX-12WSL-1826-SM-5LZW9 13.7
GTEX-11I78-1326-SM-5PNY9 12.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 6.2
Samples: 196

Max RPKM: 25.6
Min RPKM: 1.6
Std RPKM: 3
Median RPKM: 5.4
GTEX-117YW-1826-SM-5PNY5 25.6
GTEX-13S86-1626-SM-5Q5C5 19.9
GTEX-WQUQ-2526-SM-4MVNO 16.5
GTEX-S4Q7-0826-SM-4AD5E 15.2
GTEX-11TT1-1026-SM-5PNW7 13.1
GTEX-11WQK-2126-SM-5EQME 12.9
GTEX-PWOO-1326-SM-48TCJ 12.7
GTEX-13OVJ-1726-SM-5IJDZ 12.3
Show all