PFAS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.3 FPKM
GTEx:3.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA022140

 

Antibody HPA022886

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Low   Low  

Peripheral nerve/ganglion

Low   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

4.3

overview Male, age 54
Sample 1
FPKM: 2.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 3.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.0
Samples: 149

Max RPKM: 8.4
Min RPKM: 1.5
Std RPKM: 0.9
Median RPKM: 2.8
GTEX-11TT1-0926-SM-5GU5M 8.4
GTEX-13O1R-2426-SM-5KLZZ 7.4
GTEX-12WSJ-1426-SM-5GCON 5.4
GTEX-ZTTD-2626-SM-57WEX 5.2
GTEX-131XG-1526-SM-5GCNQ 5.1
GTEX-12WSL-1826-SM-5LZW9 5.0
GTEX-YJ8A-1726-SM-5P9IQ 4.9
GTEX-14C39-1626-SM-5S2P4 4.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.9
Samples: 196

Max RPKM: 7.7
Min RPKM: 0.7
Std RPKM: 1.2
Median RPKM: 3.7
GTEX-11TT1-1026-SM-5PNW7 7.7
GTEX-PWOO-1326-SM-48TCJ 7.6
GTEX-UPIC-1726-SM-4IHKG 7.1
GTEX-1128S-1626-SM-5H12O 6.8
GTEX-13OW6-2126-SM-5N9GL 6.8
GTEX-144GM-1226-SM-5LU52 6.8
GTEX-146FQ-1926-SM-5NQBY 6.8
GTEX-QDVN-1326-SM-48TZ3 6.7
Show all